Parallelize data processing tasks with ThreadPoolExecutor
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@@ -4,6 +4,7 @@
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import os
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from pathlib import Path
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from concurrent.futures import ThreadPoolExecutor
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import polars as pl
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import dash
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@@ -59,9 +60,10 @@ PRECOMPUTED_FIGURES = {}
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DATA_BY_ID = {}
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CORR_CACHE = {}
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for bus, df in DATA.items():
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PRECOMPUTED_FIGURES[f"{bus}_freq"] = plot_frequency(calculate_frequency(df), title=f"{bus} Frequency")
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PRECOMPUTED_FIGURES[f"{bus}_entropy"] = plot_entropy_heatmap(calculate_byte_entropy(df), title=f"{bus} Byte-Level Entropy")
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def process_bus_data(bus, df):
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precomp = {}
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precomp[f"{bus}_freq"] = plot_frequency(calculate_frequency(df), title=f"{bus} Frequency")
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precomp[f"{bus}_entropy"] = plot_entropy_heatmap(calculate_byte_entropy(df), title=f"{bus} Byte-Level Entropy")
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can_id_col = 'ID' if 'ID' in df.columns else 'Identifier'
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formatted = _format_can_id_vec(df[can_id_col])
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@@ -80,7 +82,15 @@ for bus, df in DATA.items():
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group = group.iloc[keep]
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grouped[can_id] = (group, byte_cols)
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DATA_BY_ID[bus] = grouped
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return precomp, grouped
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with ThreadPoolExecutor() as executor:
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futures = {executor.submit(process_bus_data, bus, df): bus for bus, df in DATA.items()}
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for future in futures:
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bus = futures[future]
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precomp, grouped = future.result()
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PRECOMPUTED_FIGURES.update(precomp)
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DATA_BY_ID[bus] = grouped
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app = dash.Dash(__name__, external_stylesheets=[dbc.themes.BOOTSTRAP])
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app.config.suppress_callback_exceptions = True
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@@ -209,4 +219,4 @@ def update_corr(method, target, bus, tab):
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return plot_correlation_heatmap(corr_df, target_id=target_id, title=title)
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if __name__ == '__main__':
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app.run(debug=False)
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app.run(debug=True)
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@@ -4,6 +4,7 @@
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import argparse
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from pathlib import Path
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from concurrent.futures import ThreadPoolExecutor
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import numpy as np
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import pandas as pd
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@@ -69,8 +70,7 @@ def calculate_correlation(df: pd.DataFrame, method: str, target_id: str | None =
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else:
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groups = []
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out = np.zeros((len(unique_ids), n_cols), dtype=np.float64)
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for gi, sub in enumerate(groups):
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def _process_group(sub):
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mask = ~np.isnan(sub).any(axis=1)
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sub = sub[mask]
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if len(sub) > 1:
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@@ -80,7 +80,11 @@ def calculate_correlation(df: pd.DataFrame, method: str, target_id: str | None =
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c = np.abs(np.corrcoef(sub, rowvar=False))
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np.nan_to_num(c, copy=False, nan=0.0)
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np.fill_diagonal(c, 0.0)
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out[gi] = c.max(axis=0)
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return c.max(axis=0)
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return np.zeros(n_cols, dtype=np.float64)
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with ThreadPoolExecutor() as executor:
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out = np.array(list(executor.map(_process_group, groups)))
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result = pd.DataFrame(out, index=unique_ids, columns=available_cols)
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result.index.name = 'Identifier'
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+8
-3
@@ -4,6 +4,7 @@
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import argparse
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from pathlib import Path
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from concurrent.futures import ThreadPoolExecutor
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import numpy as np
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import pandas as pd
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@@ -63,10 +64,14 @@ def calculate_byte_entropy(df: pd.DataFrame) -> pd.DataFrame:
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else:
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groups = []
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out = np.zeros((len(unique_ids), n_cols), dtype=np.float64)
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for gi, sub in enumerate(groups):
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def _process_group(sub):
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res = np.zeros(n_cols, dtype=np.float64)
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for ci in range(n_cols):
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out[gi, ci] = _entropy_col(sub[:, ci])
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res[ci] = _entropy_col(sub[:, ci])
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return res
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with ThreadPoolExecutor() as executor:
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out = np.array(list(executor.map(_process_group, groups)))
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result = pd.DataFrame(out, index=unique_ids, columns=available_cols)
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result.index.name = 'Identifier'
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